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Job summary

Main area
Data, Analytics Surveillance
Grade
Civil Service: Senior Civil Servant (SCS) 1
Contract
Permanent
Hours
  • Full time
  • Part time
  • Job share
  • Flexible working
37 hours per week
Job ref
919-HM-16963013
Employer
UK Health Security Agency
Employer type
Public (Non NHS)
Site
UKHSA Locations
Town
London, Leeds Birmingham, Liverpool
Salary
£75,000 - £117,800 per annum, pro rata
Salary period
Yearly
Closing
06/05/2024 23:59

Employer heading

UK Health Security Agency logo

Deputy Director, Bioinformatics

Civil Service: Senior Civil Servant (SCS) 1

The United Kingdom Health Security Agency (UKHSA) is a system leader for health security; taking action internationally to strengthen global health security, providing trusted advice to government and the public and reducing inequalities in the way different communities experience and are impacted by infectious disease, environmental hazards, and other threats to health.

UKHSA’s remit, as an agency with a global-to-local reach, is to protect the health of the nation from infectious diseases and other external threats to health. As the nation’s expert national health security agency UKHSA will:

  • Prevent: anticipate threats to health and help build the nation’s readiness, defences and health security
  • Detect: use cutting edge environmental and biological surveillance to proactively detect and monitor infectious diseases and threats to health
  • Analyse: use world-class science and data analytics to assess and continually monitor threats to health, identifying how best to control and mitigate the risks
  • Respond: take rapid, collaborative and effective actions nationally and locally to mitigate threats to health when they materialise
  • Lead: lead strong and sustainable global, national, regional and local partnerships designed to save lives, protect the nation from public health threats and reduce inequalities.

Job overview

Significant developments made during the SARS-CoV-2 pandemic, led to the establishment of strong foundations for the improved use of pathogen genomics to protect public health. Recognising this, this new post will provide specialist expertise to drive forwards the bioinformatics component of UKHSA’s work, as well as relevant elements of the pathogen genomics programme. The postholder will also work with external specialists and other clinical partners.

This post will be responsible for providing strategic leadership for the bioinformatics function of the UKHSA, as well as operational leadership of the core bioinformatics team within the Data Operations Directorate. The postholder will be responsible for identifying emerging trends, technologies, and tools in microbial genomics and bioinformatics so that the UKHSA stay at the forefront of the field, communicating complex technical concepts, contributing to grant applications, and contributing high-level input to data analysis pipelines and interpretation.

The post holder will also undertake the important role of UKHSA Head of Profession for Bioinformatics, working to champion and establish comprehensive communities of practice within UKHSA and across wider professions networks.  There is also significant potential for collaboration with academic partners.

Main duties of the job

PROFESSIONAL DEVELOPMENT

  • Identify, discuss, and action own professional performance and training / development needs with your line manager through appraisal / individual development plan. Attending internal / external training events and ensuring pursuit of programme of continuous professional development in accordance with any relevant professional registration or statutory requirements
  • To participate in all mandatory training as required, i.e., fire safety, information governance and all other mandatory training.

Working for our organisation

We pride ourselves as being an employer of choice, where Everyone Matters promoting equality of opportunity to actively encourage applications from everyone, including groups currently underrepresented in our workforce.   

UKHSA ethos is to be an inclusive organisation for all our staff and stakeholders. To create, nurture and sustain an inclusive culture, where differences drive innovative solutions to meet the needs of our workforce and wider communities. We do this through celebrating and protecting differences by removing barriers and promoting equity and equality of opportunity for all.  

Detailed job description and main responsibilities

The Deputy Director oversees a broad programme of work including:  

  • Developing and implementing the strategic vision for bioinformatics in alignment with UKHSA’s wider goals and in particular its Pathogen Genomics Strategy
  • Line management responsibility for the core bioinformatics team
  • Delivery of complex projects that require cross Agency engagement and multi-disciplinary working
  • Providing a focal point for bioinformatics within the Agency including undertaking the role of Head of Profession for bioinformatics. This will include promoting training, bringing teams together, ensuring that Bioinformaticians across the Agency are aligned to strategic priorities, are following guidelines, and working within defined remit
  • Identifying emerging trends, technologies, and tools in microbial genomics and bioinformatics to stay at the forefront of the field
  • Communicating complex technical concepts to both technical and non-technical stakeholders across all organisation-levels
  • Contributing to external presentations and grant applications, and engaging in academic collaborations relevant to genomics and bioinformatics
  • Working with external partners to ensure best practice is shared and collaboration are in place to continuously improve the service
  • Provide strategic and operational leadership across groups and oversee work of Programme lead to ensure all core bioinformatics projects, including managing timelines, budgets, and resources, while maintaining a high quality of work and analysis
  • Contributing high-level input to data analysis pipelines and interpretation
  • Collaborating with other teams and wet lab scientists to provide bioinformatics support
  • Ensuring that the service provides expert advice for wider public health delivery to internal and external customers.
  • Having strategic and operational oversight of the development and maintenance of bioinformatics pipelines and keeping them efficient, accurate, and up to date, while ensuring that best practices are upheld
  • Working closely with Data, Analytics and Surveillance colleagues, ensure strategic alignment with the UKHSA Technology Strategy, in the context of data storage, archiving etc and that technology requirements are fit for purpose to support the ongoing Bioinformatics pipelines and requirements
  • Ensuring strategic engagement with all parts of the UKHSA that contribute to pathogen genomic surveillance, supporting a “one system” approach, including ensuring sequencing data are available as required

KEY WORKING RELATIONSHIPS

The post holder will develop working relationships and communicate regularly with a wide range of individuals, clinical and non-clinical, internal, and external to UKHSA. This will include.

Internal

  • Directors and Deputy Directors across
    • Science
    • Clinical and Public Health
    • Technology
    • Health Protection Operations
    • Data, Analytics and Surveillance
  • Science Data and Performance Lead
  • Relevant colleagues across wider UKHSA

External

  • Key academic partners
  • Relevant stakeholders within Cabinet Office and HM Treasury, other government departments, non-departmental bodies, and potential funding organisations
  • Professional leads across HMG
  • Relevant stakeholders within identified external data providers and users (public and private sector)
  • Devolved Administrations, departments, and organisations
  • Private sector leaders

Application stage

Applicants are strongly advised to use the criteria in the Person Specification of the Job Description as sub-headings in their application to make it clear how they meet each of the selection criteria.

At sift stage you will be assessed on the essential criteria listed in the job advert and statement of suitability.

Your statement of suitability must be no more than 1500.

Feedback will not be provided at this stage. 

Interview stage

This vacancy is being assessed using Success Profiles. During the interview we will assess your Behaviours and Experience.
 
Behaviours to be assessed:

  • Leadership
  • Seeing the Big Picture
  • Working together
  • Communicating and influencing
  • Managing a quality service

You will be asked to prepare and present a 5-10 minute presentation. The subject of this will be sent to you prior to interview.

Location information  

UKHSA operates a hybrid working model where business needs allow.  This provides us with greater flexibility about how and where we work, to get the best from our workforce.  As a hybrid worker, you will usually spend a minimum of 60% of your contracted hours (averaged over a month) working at UKHSA’s locations (London incl Colindale, Leeds, Liverpool, Birmingham). That is approximately 3 days a week in the office (pro rata) and the rest of your time working from home. Majority of the team is Colindale based and therefore there is an expectation to travel on regular basis.  Specialist or regional roles will be based at the appropriate UKHSA site. For certain roles, some additional flexibility may be possible, which will be agreed upon with the hiring manager based on individual requirements and business needs. 

Option 1 - External  

Open to all external applicants (anyone) from outside the Civil Service (including by definition internal applicants).  

Security Clearance Level Requirement:

Successful candidates must pass a disclosure and barring security check.  

Successful candidates must meet the security requirements before they can be appointed. The level of security needed: SC.  

Working for the Civil Service  

The Civil Service embraces diversity and promotes equal opportunities. As such, we run a Disability Confident Scheme (DCS) for candidates with disabilities who meet the minimum selection criteria. 

The Civil Service Code sets out the standards of behaviour expected of civil servants.  
  
We recruit by merit on the basis of fair and open competition, as outlined in the Civil Service Commission's recruitment principles.  

The Civil Service welcomes applications from people who have recently left prison or have an unspent conviction. Read more about prison leaver recruitment.  

It’s important to note that there are currently exceptions to applications being considered if your conviction relates to any of the following:  

  • life sentences  
  • arson 
  • sexual offences 
  • hate and terror offences  

Some departments will also consider the specific offence against the nature of the business, i.e., a conviction for fraud may rule you out for a finance role.  

Reserve List:

Candidates who pass the interview criteria but are not offered a post will be kept on a reserve list for 12 months and may be contacted if similar roles become available. 

If you are interviewed for the post and do not meet the required threshold for the specified grade, your application may be assessed against a similar, lower grade role and you may be offered the post should one be available 

Starting salary:

New entrants to the Civil Service are expected to start on the minimum of the pay band.   

The internal roles rules apply to existing Civil Servants, i.e. level transfers move on current salary or the pay range minimum, transfers on promotion move to new pay range minimum or receive 10% increase.   

Either case is determined by whichever is the highest.  

For further details please refer to the Information Sheet- Starting Salaries & Benefits attachment 

Further information 

The law requires that selection for appointment to the Civil Service is on merit on the basis of fair and open competition as outlined in the Civil Service Commission's Recruitment Principles. 

If you feel your application has not been treated in accordance with the Recruitment Principles, and you wish to make a complaint, in the first instance, you should contact UKHSA Public Accountability Unit via email: [email protected]

If you are not satisfied with the response you receive from the Department, you can contact the Civil Service Commission: Visit the Civil Service Commission website here

Person specification

Qualifications

Essential criteria
  • A PhD in bioinformatics or microbiology with a heavy bioinformatics component OR MSc / PhD (or equivalent experience) within a life sciences subject such as bioinformatics, biology, medicine, statistics, etc with significant hands-on experience in Computational Biology gained within a relevant setting

Knowledge and Experience

Essential criteria
  • 5+ years relevant experience
  • Proven leadership and line management skills, demonstrating your ability to guide a team effectively
  • A track record of leading the development and implementation of bioinformatics software
  • Hands-on experience with genomic sequencing and troubleshooting of bioinformatic pipelines
  • Knowledge of microbial whole genome sequencing techniques and tools, including short and long read sequencing
  • Familiarity with Illumina sequencing platforms, such as MiSeq and NextSeq, along with expertise in Sanger sequencing
Desirable criteria
  • Proven expertise in transcriptomics, particularly RNA-seq data analysis
  • Experience in predicting biosynthetic gene clusters from genomic data
  • Prior experience with network analysis and machine learning to analyse large datasets
  • Prior experience of working with relational databases, with a focus on MySQL
  • Experience with cloud computing, especially Oracle Cloud Infrastructure (OCI)

Skills / Capabilities / Behaviours

Essential criteria
  • Proficiency in Python, Snakemake, and R, showcasing your programming expertise
Desirable criteria
  • Proficiency in containerization, specifically Docker, to streamline data analysis workflows
  • Familiarity in translating research bioinformatic techniques into practice (e.g, through UKAS accreditation)
  • Familiarity with DevOps / Sysadmin

Equality and Diversity

Essential criteria
  • An understanding of and commitment to equality of opportunity and good working relationships.

Employer certification / accreditation badges

Purple SpaceApprenticeships logoNo smoking policyAge positiveImproving working livesMindful employer.  Being positive about mental health.Disability confident employerThe Employers Network for Equality & Inclusion (enei) is the UK's leading employer network covering all aspects of equality and inclusion issues in the workplace.Carer Confident -AccomplishedHappy to Talk Flexible Working

Documents to download

Apply online now

Further details / informal visits contact

Name
Sam Organ
Job title
Director, Data Operations
Email address
[email protected]
Additional information

For more information about the role please contact:

Sam Organ, Director, Data Operations - [email protected]

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